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feat(body_axis): add skeleton-agnostic AP inference #945

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feat(body_axis): add skeleton-agnostic AP inference #945

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872cb0d
feat: Add compute_polarization for collective behavior analysis
khan-u Mar 7, 2026
fc2bab5
test(kinematics): add polarization edge cases and clarify first-frame…
khan-u Mar 17, 2026
a1896bc
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 17, 2026
0087208
linting fix
khan-u Mar 17, 2026
0af9dc7
test(collective): consolidate related polarization tests to reduce re…
khan-u Mar 18, 2026
758ea04
feat(kinematics): add displacement_frames and return_angle params to …
khan-u Mar 18, 2026
e271a8c
refactor(collective): Rewrite compute_polarization with robust valida…
khan-u Mar 18, 2026
2bd4386
test(collective): add .sel() keypoint selection test, clarify docs
khan-u Mar 18, 2026
aef4ee9
refactor(polarization): rename heading_keypoints to body_axis_keypoin…
khan-u Mar 18, 2026
6efe00e
linting fix
khan-u Mar 19, 2026
8182d05
docs(polarization) use neutral u_hat notation for unit direction vector
khan-u Mar 19, 2026
96ef674
test(collective): add mathematical invariance, edge case, & validatio…
khan-u Mar 19, 2026
7d61af5
feat(polarization): add in_degrees parameter + unit test
khan-u Mar 19, 2026
9313b9d
SonarCloud warning fixes
khan-u Mar 20, 2026
6dd7fbb
refactor(collective): use more vector.py utilities for polarization c…
khan-u Apr 4, 2026
51866c9
feat(collective): add prior-free body-axis inference
khan-u Apr 2, 2026
1bd1618
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Apr 4, 2026
14e2674
refactor(collective) extract out AP validation into body_axis.py
khan-u Apr 4, 2026
b1df3b9
update(body_axis) new config params optimized via grid search
khan-u Apr 5, 2026
15fd84d
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Apr 5, 2026
2e828f4
fix(test_collective): nomenclature perpendicular -> cardinal direccti…
khan-u Apr 8, 2026
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2 changes: 2 additions & 0 deletions movement/kinematics/__init__.py
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Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
"""Compute variables derived from ``position`` data."""

from movement.kinematics.collective import compute_polarization
from movement.kinematics.distances import compute_pairwise_distances
from movement.kinematics.kinematics import (
compute_acceleration,
Expand Down Expand Up @@ -32,4 +33,5 @@
"compute_head_direction_vector",
"compute_forward_vector_angle",
"compute_kinetic_energy",
"compute_polarization",
]
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