Adding tutorial for GJR setup for admins to monitoring tutorial#6798
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TomasVondrak wants to merge 6 commits intogalaxyproject:mainfrom
Open
Adding tutorial for GJR setup for admins to monitoring tutorial#6798TomasVondrak wants to merge 6 commits intogalaxyproject:mainfrom
TomasVondrak wants to merge 6 commits intogalaxyproject:mainfrom
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Added Galaxy Job Radar information and joining instructions to the monitoring tutorial.
Updated the description of Galaxy Job Radar and improved clarity on the InfluxDB setup note.
TomasVondrak
requested review from
bgruening,
hexylena,
martenson,
mira-miracoli and
natefoo
as code owners
shiltemann
reviewed
Apr 22, 2026
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shiltemann
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shiltemann
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thanks a lot!
Please also add yourself to the CONTRIBUTORS.yaml file and as a contributor on this tutorial :)
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| Simplified schema of the full setup: | ||
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| <img width="537" height="212" alt="galaxy_data_flow" src="https://github.com/user-attachments/assets/b8d4dc16-8542-4c41-9e1b-b7800781c819" /> |
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Please add any images directly in the GTN.
Markdown syntax is preferred. If you need to set size, you can still do so, e.g.
{: width="537"}
shiltemann
reviewed
Apr 22, 2026
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| 1) Your Galaxy needs to be sending data to your InfluxDB via [gxadmin scripts](https://github.com/usegalaxy-eu/infrastructure-playbook/tree/master/roles/usegalaxy-eu.job-radar-stats-influxdb) | ||
| 1) You give us access to read the InfluxDB (we need: `influxdb_password_var_name;influxdb_host;influxdb_port;influxdb_username`) and some basic information about your server (we need: `name;lat;long;`) | ||
| 1) You send us information about your Pulsar servers (we need: `galaxy;pulsar_id;lat;long;node_count;desc`) | ||
| 1) Wait few days and your Galaxy and Pulsars show up at [https://gjr.metacentrum.cz](https://gjr.metacentrum.cz) |
Member
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I assume you want this to render as a list? Then you need periods in stead of parentheses (and I'm adding proper numbering for readability):
Suggested change
| 1) Your Galaxy needs to be sending data to your InfluxDB via [gxadmin scripts](https://github.com/usegalaxy-eu/infrastructure-playbook/tree/master/roles/usegalaxy-eu.job-radar-stats-influxdb) | |
| 1) You give us access to read the InfluxDB (we need: `influxdb_password_var_name;influxdb_host;influxdb_port;influxdb_username`) and some basic information about your server (we need: `name;lat;long;`) | |
| 1) You send us information about your Pulsar servers (we need: `galaxy;pulsar_id;lat;long;node_count;desc`) | |
| 1) Wait few days and your Galaxy and Pulsars show up at [https://gjr.metacentrum.cz](https://gjr.metacentrum.cz) | |
| 1. Your Galaxy needs to be sending data to your InfluxDB via [gxadmin scripts](https://github.com/usegalaxy-eu/infrastructure-playbook/tree/master/roles/usegalaxy-eu.job-radar-stats-influxdb) | |
| 2. You give us access to read the InfluxDB (we need: `influxdb_password_var_name;influxdb_host;influxdb_port;influxdb_username`) and some basic information about your server (we need: `name;lat;long;`) | |
| 3. You send us information about your Pulsar servers (we need: `galaxy;pulsar_id;lat;long;node_count;desc`) | |
| 4. Wait few days and your Galaxy and Pulsars show up at [https://gjr.metacentrum.cz](https://gjr.metacentrum.cz) |
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
![github-actions[bot]](https://avatars.githubusercontent.com/in/15368?s=60&v=4){kind=small}
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| [CESNET](https://www.cesnet.cz/en) manages a central instance of GJR at [https://gjr.metacentrum.cz](https://gjr.metacentrum.cz) | ||
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| **Galaxy Job Radar admins invite any public Galaxy servers to join this effort and share the anonymous data about their jobs with the central instance.** |
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This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.
Suggested change
| **Galaxy Job Radar admins invite any public Galaxy servers to join this effort and share the anonymous data about their jobs with the central instance.** | |
| **### Galaxy Job Radar admins invite any public Galaxy servers to join this effort and share the anonymous data about their jobs with the central instance.** |
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I have added to monitoring tutorial for admins section where I describe how they can join (for testing and monitoring purposes) Galaxy Job Radar central visualization at CESNET (https://gjr.metacentrum.cz/). We were thinking that this is probably the best place where we can put the tutorial so that any galaxy admin who would like to join the visualization can find the information.