Single cell wrapper and removal of barcodesToFilter, sampleName, cleanReads#561

Merged

ch99l merged 11 commits intodevel_pre_v4from

sc_spatial_wrapper

Apr 20, 2026

Commits on Apr 15, 2026

refactor(args): rename demultiplexed to extractBarcodeUMI, remove cleanReads/sampleNames/barcodesToFilter, drop CSV input for demultiplexed and clusters
ch99l
committed
feat: add bambu.singlecell and bambu.spatial wrapper functions
ch99l
committed

Commits on Apr 17, 2026

Commits on Apr 20, 2026