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Addraed/README.md

👋 Hi, I’m Manu !

Typing SVG

I work at the intersection of biotechnology, data systems and software engineering, building tools that bridge scientific workflows with robust, production-ready code.
I enjoy creating automation pipelines, data workflows, interactive apps and secure systems, combining my background in Bioinformatics, Biology and IT.


🚀 What I Do

  • 🧬 Bioinformatics & Data Science – pipelines (Python/R/Bash), analysis & visualization, genomics tooling, scientific computing.
  • 💻 Software Development – Python apps (Tkinter, asyncio, FastAPI, CLI), full-stack/back-end scripting, Excel/Access/VBA automation, ETL & APIs.
  • 🔐 Cybersecurity & Infrastructure – secure dev practices, network config & analysis, scripting for automation, auditing and hardening.

🧩 Highlighted Projects

  • Cybersecurity Analysis on a LAMP server – NIST compliant cybersecurity analysis of a compromised machine, from breach identification and containment to security hardening and DLP suggestions.
  • VBA Automation Modules – import mappers, dynamic range parsers and data pipelines for Excel ↔ Access.
  • DevOps / Network Exercises – ACL configs, automation scripts and small network labs.

(More projects coming — some currently private!)


🛠️ Tech Stack

My Skills

Languages
Python · R · SQL (Oracle/MySQL) · VBA · Bash · Java · JavaScript

Tools & Frameworks
Pandas · NumPy · Tkinter · FastAPI · Mutagen · ReportLab · Dataview/Obsidian · Access DAO · Git · Node.js

Cloud & Systems
Linux · Docker · GitHub Actions · Virtualization · Networking (Cisco/Packet Tracer)

Bioinformatics
Biopython · FASTA/FASTQ workflows · Alignment tools · Genomic data handling


📊 GitHub Stats & Languages

GitHub Stats

Top Langs

github contribution snake

📚 My Background

  • MSc Bioinformatics & Biostatistics
  • BSc Biology (Honors)

Professional experience in public-sector IT, automation and data processing.
I like solving problems that combine science, engineering and creativity — whether it’s a bioinformatics pipeline, a Python app or workflow automation.


📫 Find Me Here!

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  1. Melanoma-Data-Visualization-App Melanoma-Data-Visualization-App Public

    A bioinformatics master's thesis project applying unsupervised machine learning (FP-Growth) on TCGA-SKCM genomic data to identify clinical patterns across melanoma mutation subtypes, with an intera…

    Jupyter Notebook

  2. cybersecurity-final-project cybersecurity-final-project Public

    A hands-on cybersecurity final project simulating a real-world server breach. Covers forensic analysis, penetration testing, vulnerability remediation, and incident response planning following NIST…

  3. MetaMusicExtract MetaMusicExtract Public

    A desktop tool for extracting and exporting music file metadata to Excel. Features folder scanning with recursive search, supports MP3, FLAC, M4A and OGG formats. Includes field selection, humanize…

    Python