Bugfixes

Author: fredericjs

CHANGELOG.md

@@ -1,3 +1,6 @@
+## v0.16.4
+- Fixed wrongful designation of stepheight parameters as batch operations instead of parameters
+- Fixed orientation of 3d plot (thanks to juanmigueltiscar)
 ## v0.16.3
 - Fixed decode error for vk4 files with encodings other than utf-8
 - Changed default parameter for encoding to 'auto'

surfalize/plotting.py

@@ -103,8 +103,8 @@ def plot_3d(surface, vertical_angle=50, horizontal_angle=0, zoom=1, cmap='jet',
                                     surface.step_y / factor)
 
     # Generate a grid of x, y values
-    x = np.flip(np.linspace(0, surface.width_um, surface.size.x))
-    y = np.linspace(0, surface.height_um, surface.size.y)
+    x = np.linspace(0, surface.width_um, surface.size.x)
+    y = np.flip(np.linspace(0, surface.height_um, surface.size.y))
     x, y = np.meshgrid(x, y)
 
     # Define a mathematical function for z values

surfalize/surface.py

@@ -1207,7 +1207,7 @@ def _stepheight_get_upper_lower_median(self):
         lower_median = np.median(self.data[~mask])
         return upper_median, lower_median
 
-    @batch_method('operation')
+    @batch_method('parameter')
     @cache
     def stepheight(self):
         """
@@ -1221,7 +1221,7 @@ def stepheight(self):
         step_height = upper_median - lower_median
         return step_height
 
-    @batch_method('operation')
+    @batch_method('parameter')
     def cavity_volume(self, threshold=0.50):
         """
         Calculates the cavity volume of a flat surface containing an ablation crater with a leveled bottom plane.